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IDENTIFIERS
Sample ID: |
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TAXONOMY
Phylum | Arthropoda | Subfamily | Cassidinae |
Class | Insecta | Genus | Octodonta |
Order | Coleoptera | Species | Octodonta nipae |
Family | Chrysomelidae | Subspecies |
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SPECIMEN DETAILS
Life Stage | Brief Note | ||
Sex | |||
Tissue | |||
Voucher Status |
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COLLECTION DETAILS
Country | Date Collected: | ||
Province/State | Collectors | ||
Region/County | Elevation | ||
Sector | Elv. Accuracy | ||
Exact Site | Brief Note | ||
Latitude | |||
Longitude | |||
Coord Source | |||
Coord Accuracy |
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SEQUENCE: | COI | ||
Sequence ID | GenBank Accession | KF939632 | |
Last Updated | Genome | Mitochondrial genome | |
Locus | |||
Nucleotides | 945 bp | ||
ATCACCGCTATCCTCCTACTCCTTTCTCTCCCCGTTTTAGCAGGAGCTATTACCATACTATTAACTGACCGAAACATCAACA CATCATTTTTTGACCCAGCTGGGGGAGGAGATCCCATTCTTTACCAACACTTATTTTGATTTTTTGGACATCCGGAAGTTTA TATTTTGATTCTCCCAGGATTTGGGATAATCTCCCACATCATTAGCCAAGAAAGTGGAAAAAAAGAAACCTTTGGAGTCCT AGGAATAATTTATGCAATAATAGCTATTGGATTATTAGGATTTGTAGTTTGAGCACATCACATATTTACTGTAGGAATAGAT GTAGACACACGAGCTTATTTCACTTCAGCCACAATAATCATCGCAGTACCTACTGGTATCAAAATCTTCAGATGAATAGCA ACTTACCATGGTGTAAAACTACAATTCAACCCTCTAACTTTATGATCTCTGGGATTTGTATTCCTTTTCACAGTAGGAGGACT AACTGGAATTGTTCTAGCCAATTCATCAATTGATATTATTCTCCACGATACATACTATGTTGTAGCCCATTTTCATTATGTATT GTCAATAGGTGCAGTATTCGCAATTATAGGAGGATTTAGACAATGATTCCCCCTAATTACAGGAACAACCCTTAATGAAAA ATTTATAAAAATTCAATTCATTGTTATATTCATTGGAGTTAATTTAACTTTTTTCCCACAACATTTCTTAGGATTAAGAGGCAT GCCTCGGCGATACTCAGATTATCCGGACTCCTTTACTTTATGAAACGCCGTTTCATCAATTGGTTCCCTAATTTCTCTTATTG GAATTATTTATTTAGTTTTCGTAATTTGAGAAAGTTTTACAGCACAACGAAAAAGCATTACCAACTTAAATATGTCTACATCA ATAGAATGAGCTCAAAATACCCCACCAGCAGAACATAGA | |||
Amino Acids | |||
ITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIISQESGKKETFGVLGMIY AMMAIGLLGFVVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWMATYHGVKLQFNPLTLWSLGFVFLFTVGGLTG IVLANSSIDIILHDTYYVVAHFHYVLSMGAVFAIMGGFSQWFPLITGTTLNEKFMKIQFIVMFIGVNLTFFPQHFLGLSGMPRR YSDYPDSFTLWNAVSSIGSLISLIGIIYLVFVIWESFTAQRKSITNLNMSTSMEWAQNTPPAEHS | |||
Illustrative Barcode | |||
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Length | Pcr Primers | Read(5’-3’) | Status | References |
945 bp | C1-J-2195/ TL2-N-3014 | Forward primer：TTGATTTTTTGGTCATCCAGAAGT Reverse primer：TCCAATGCACTAATCTGCCATATTA | high qual | 【1】【2】 |
F/ R | Forward primer：CTTGAGCTGTTATATCACCG Reverse primer：TTCATAAAGTAAAGGAGTCCG | high qual | 【2】 |
REFERENCES
[1] Simon, C., Frati, F., Beckenbach, A., Crespi, B., Liu, H., & Flook, P. (1994). Evolution, Weighting, and Phylogenetic Utility of Mitochondrial Gene Sequences and a Compilation of Conserved Polymerase Chain Reaction Primers. Annals of the Entomological Society of America, 87(6), 651–701. doi:10.1093/aesa/87.6.651 [2] Zhang, X., Tang, B., & Hou, Y. (2015). A Rapid Diagnostic Technique to Discriminate between Two Pests of Palms, Brontispa longissima and Octodonta nipae (Coleoptera: Chrysomelidae), for Quarantine Applications. Journal of Economic Entomology, 108(1), 95–99. doi:10.1093/jee/tou025 |
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