红脂大小蠹

二维码
物种名称 Chinese Name 红脂大小蠹
学名 Scientific Name Dendroctonus valens
样本详情评论(0)

IDENTIFIERS


Sample ID:



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TAXONOMY


Phylum
Arthropoda
Subfamily
Scolytinae
Class
Insecta
Genus
Dendroctonus
Order
Coleoptera
Species
Dendroctonus valens
Family
Curculionidae
Subspecies


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SPECIMEN DETAILS


Life Stage

Brief Note

Sex



Tissue



Voucher Status




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COLLECTION DETAILS


Country

Date Collected:   

Province/State

Collectors

Region/County

Elevation

Sector

Elv. Accuracy

Exact Site

Brief Note

Latitude



Longitude



Coord Source



Coord Accuracy




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SEQUENCE:
COI
Sequence ID

GenBank Accession
OL689184
Last Updated

Genome
Mitochondrial genome
Locus

Nucleotides
1540 bp

ATTTTACCGAATAAATGATTATATTCTACAAATCATAAAGATATTGGTACTCTATATTTTATCTTTGGAGCTTGGTCAGGGAT

AGTAGGAACTTCATTAAGATTAATTATTCGAACAGAATTAGGGACCCCAGGAAGGTTAATCGGAGATGACCAAATTTATAA
CACTATTGTGACTGCACATGCTTTTATCATAATTTTTTTTATAGTTATACCTATTATAATTGGGGGATTTGGTAATTGATTAGT
CCCATTAATATTAGGGGCCCCAGATATAGCTTTCCCTCGATTAAACAATATAAGATTCTGACTCCTACCCCCTTCTTTAACAT
TTTTATTATTAAGAAGAATCATTGATAAAGGAGCTGGTACTGGGTGAACAGTATACCCCCCTTTAGCCTCCAATCTATCTCAC
GAAGGATCCTCTGTAGACTGTGCGATTTTCAGTCTTCATATGGCGGGTATCTCATCTATCCTAGGAGCTATTAATTTTATCTCT
ACAATTATAAATATAAACCCTTCAGGAATAAAGCTAGACCGATTAACCCTATTTACTTGAGCAGTAAAAATCACAGCTATTCT
ATTATTGCTATCTTTACCAGTATTAGCAGGGGCTATTACTATATTATTAACAGACCGAAATATCAACACTACTTTCTTTGACCC
TTCAGGGGGAGGAGACCCCATTTTATATCAGCACTTATTTTGATTTTTTGGCCACCCAGAAGTATACATTTTAATCCTACCAG
GATTTGGGATAATTTCTCATATTATCAGACAAGAAAGAGGTAAAAAGGAAGCTTTTGGATTACTGGGTATAATCTATGCTATA
ATAGCAATTGGCCTATTAGGATTTGTAGTATGAGCTCATCACATATTTACAGTAGGAATAGATGTGGACACCCGAGCCTATTT
TACATCTGCTACAATAATTATCGCAGTTCCTACGGGAATTAAAATTTTTAGATGGCTCGCCACATACCATGGGTCCCAAATCA
GGCTAACTCCTTCCTCTCTATGAGCTATTGGATTCATTTTTCTTTTTACTATAGGAGGTTTAACAGGTGTAATTTTAGCAAACTC
ATCAATTGATATTATTTTACATGATACCTATTATGTAGTAGCTCATTTTCATTATGTACTCTCTATAGGAGCAGTCTTCGCTATCC
TGGGGGGAGTAATCCAATGATTTCCTCTCTTTACAGGACTAACTTTAAACAATAAGTACTTAAAAATTCAATTTCTATCAATATT
TATTGGAGTAAATTTAACCTTCTTCCCTCAACACTTTTTAGGGCTAAGAGGTATGCCCCGCCGTTATTCAGATTACCCTGATGCC
TACTACCTATGAAATATAATTTCTTCAATTGGAAGAATAATCTCTATAATTAGAATTATTTACTTTATTTTTATCCTATGGGAAGC
TTTCACATCTAAACGATTAAATTTAACTTCTCTAAATACCCCAACATCTATCGAATGATTCCAATATTTTCCCCCAGCAGAACAT
AGTTATGATGAACTTCCTATAGTAACTAATT
Amino Acids


MLPNKWLYSTNHKDIGTLYFIFGAWSGMVGTSLSLIIRTELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLV
PLMLGAPDMAFPRLNNMSFWLLPPSLTFLLLSSIIDKGAGTGWTVYPPLASNLSHEGSSVDCAIFSLHMAGISSILGAINFISTI
MNMNPSGMKLDRLTLFTWAVKITAILLLLSLPVLAGAITMLLTDRNINTTFFDPSGGGDPILYQHLFWFFGHPEVYILILPGFG
MISHIISQESGKKEAFGLLGMIYAMMAIGLLGFVVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLATYHGSQISLT
PSSLWAIGFIFLFTMGGLTGVILANSSIDIILHDTYYVVAHFHYVLSMGAVFAILGGVIQWFPLFTGLTLNNKYLKIQFLSMFIGV
NLTFFPQHFLGLSGMPRRYSDYPDAYYLWNMISSIGSMISMISIIYFIFILWEAFTSKRLNLTSLNTPTSIEWFQYFPPAEHSYDE
LPMVTN


Illustrative Barcode




Length
Pcr Primers
Read(5’-3’)
Status
Reference

DVF7/ DVR6


Forward primer
GGGGTGCTTCTAGTTACCTTATAAC
Reverse primerGGCTGGCAGGATTGTTCAAACTATTTCA


high qual
1
1540 bp
F2441/ R3014
Forward primerCCTACAGGAATTAAAATTTTTAGTTGATTAGC Reverse primerTCCATTGCACTAATCTGCCATATTA
high qual
1】【2


REFERENCE


[1] Zhang SN, Shi FM, Xu YB, Tao JX, Zong S. 2022. Characterization of the complete mitochondrial genome of Dendroctonus valens and elimination of nuclear
mitochondrial pseudogene interference. J Appl Entomol. 146(7):801–812
[2] Simons, K. T., Ruczinski, I., Kooperberg, C., Fox, B. A., Bystroff, C., & Baker, D. (1999). Improved recognition of native-like protein structures using a combination
of sequence-dependent and sequence-independent features of proteins. Proteins, 34, 82– 95. https://doi.org/10.1002




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